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    ATG10 autophagy related 10 [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105599132, updated on 13-Mar-2024

    Summary

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    Gene symbol
    ATG10
    Gene description
    autophagy related 10
    See related
    Ensembl:ENSCATG00000032132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
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    Genomic context

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    See ATG10 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002401.1 (14618172..14928985, complement)

    NW_012002401.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1 like Neighboring gene ribosomal protein S23 Neighboring gene single stranded DNA binding protein 2 Neighboring gene acyl-CoA thioesterase 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012002401.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Atg12 transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in macroautophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein lipidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein modification by small protein conjugation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-like-conjugating enzyme ATG10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012002401.1 Reference Caty_1.0

      Range
      14618172..14928985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012089127.1 → XP_011944517.1  ubiquitin-like-conjugating enzyme ATG10 isoform X4

      Conserved Domains (1) summary
      pfam03987
      Location:64 → 131
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    2. XM_012089117.1 → XP_011944507.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944507.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    3. XM_012089122.1 → XP_011944512.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944512.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    4. XM_012089125.1 → XP_011944515.1  ubiquitin-like-conjugating enzyme ATG10 isoform X2

      Conserved Domains (1) summary
      pfam03987
      Location:97 → 144
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    5. XM_012089126.1 → XP_011944516.1  ubiquitin-like-conjugating enzyme ATG10 isoform X3

      Conserved Domains (1) summary
      pfam03987
      Location:74 → 141
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    6. XM_012089121.1 → XP_011944511.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944511.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Related
      ENSCATP00000016374.1, ENSCATT00000040535.1
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    7. XM_012089119.1 → XP_011944509.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944509.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    8. XM_012089120.1 → XP_011944510.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944510.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    9. XM_012089123.1 → XP_011944513.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944513.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    10. XM_012089118.1 → XP_011944508.1  ubiquitin-like-conjugating enzyme ATG10 isoform X1

      See identical proteins and their annotated locations for XP_011944508.1

      UniProtKB/TrEMBL
      A0A2K5LTV0
      Conserved Domains (1) summary
      pfam03987
      Location:12 → 207
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    11. XM_012089128.1 → XP_011944518.1  ubiquitin-like-conjugating enzyme ATG10 isoform X5

      See identical proteins and their annotated locations for XP_011944518.1

      Conserved Domains (1) summary
      pfam03987
      Location:58 → 125
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain

    12. XM_012089129.1 → XP_011944519.1  ubiquitin-like-conjugating enzyme ATG10 isoform X5

      See identical proteins and their annotated locations for XP_011944519.1

      Conserved Domains (1) summary
      pfam03987
      Location:58 → 125
      Autophagy_act_C; Autophagocytosis associated protein, active-site domain
    Nucleotide Protein
    Heading Accession and Version

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