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    LOC105590456 zinc finger protein 354A-like [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105590456, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105590456
    Gene description
    zinc finger protein 354A-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
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    Genomic context

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    See LOC105590456 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001120.1 (879581..931581, complement)

    NW_012001120.1Genomic Context describing neighboring genes Neighboring gene dual specificity protein kinase CLK4-like Neighboring gene uncharacterized LOC105590455 Neighboring gene acetoacetyl-CoA synthetase-like Neighboring gene coiled-coil domain-containing protein 86-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012001120.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: zinc finger protein 354A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012001120.1 Reference Caty_1.0

      Range
      879581..931581 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012070067.1 → XP_011925457.1  LOW QUALITY PROTEIN: zinc finger protein 354A-like

      Conserved Domains (6) summary
      smart00349
      Location:360 → 418
      KRAB; krueppel associated box
      COG5048
      Location:586 → 946
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:842 → 862
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:360 → 399
      KRAB; KRAB box
      pfam13465
      Location:714 → 739
      zf-H2C2_2; Zinc-finger double domain
      pfam15671
      Location:100 → 301
      PRR18; Proline-rich protein family 18
    Nucleotide Protein
    Heading Accession and Version

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