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    RNF34 ring finger protein 34 [ Colobus angolensis palliatus ]

    Gene ID: 105516338, updated on 14-Nov-2024

    Summary

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    Gene symbol
    RNF34
    Gene description
    ring finger protein 34
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Colobus angolensis palliatus (sub-species: palliatus)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF34 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012116043.1 (6945238..6969175, complement)

    NW_012116043.1Genomic Context describing neighboring genes Neighboring gene ORAI calcium release-activated calcium modulator 1 Neighboring gene lysine demethylase 2B Neighboring gene anaphase promoting complex subunit 5 Neighboring gene calcium/calmodulin dependent protein kinase kinase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012116043.1 Unplaced Scaffold Reference Cang.pa_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of extrinsic apoptotic signaling pathway via death domain receptors IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF34

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cang.pa_1.0

    Genomic

    1. NW_012116043.1 Reference Cang.pa_1.0

      Range
      6945238..6969175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011948514.1 → XP_011803904.1  E3 ubiquitin-protein ligase RNF34 isoform X2

      Conserved Domains (1) summary
      cd15769
      Location:59 → 105
      FYVE_CARP1; FYVE-like domain found in caspase regulator CARP1 and similar proteins

    2. XM_011948513.1 → XP_011803903.1  E3 ubiquitin-protein ligase RNF34 isoform X1

      Conserved Domains (1) summary
      cd15769
      Location:60 → 106
      FYVE_CARP1; FYVE-like domain found in caspase regulator CARP1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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