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    PRNP prion protein (Kanno blood group) [ Colobus angolensis palliatus ]

    Gene ID: 105511027, updated on 13-Mar-2024

    Summary

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    Gene symbol
    PRNP
    Gene description
    prion protein (Kanno blood group)
    See related
    Ensembl:ENSCANG00000009184
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Colobus angolensis palliatus (sub-species: palliatus)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
    Orthologs
    human mouse all
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    Genomic context

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    See PRNP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115121.1 (5728708..5746473, complement)

    NW_012115121.1Genomic Context describing neighboring genes Neighboring gene isopentenyl-diphosphate Delta-isomerase 1 pseudogene Neighboring gene prion like protein doppel

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012115121.1 Unplaced Scaffold Reference Cang.pa_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    major prion protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cang.pa_1.0

    Genomic

    1. NW_012115121.1 Reference Cang.pa_1.0

      Range
      5728708..5746473 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011941038.1 → XP_011796428.1  major prion protein isoform X2

      Conserved Domains (3) summary
      smart00157
      Location:57 → 251
      PRP; Major prion protein
      pfam00377
      Location:168 → 251
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:35 → 62
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    2. XM_011941037.1 → XP_011796427.1  major prion protein isoform X1

      Conserved Domains (3) summary
      smart00157
      Location:57 → 274
      PRP; Major prion protein
      pfam00377
      Location:168 → 285
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:35 → 62
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    3. XM_011941039.1 → XP_011796429.1  major prion protein isoform X3

      See identical proteins and their annotated locations for XP_011796429.1

      UniProtKB/TrEMBL
      A0A2K5HDT2
      Conserved Domains (2) summary
      smart00157
      Location:23 → 240
      PRP; Major prion protein
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    4. XM_011941040.1 → XP_011796430.1  major prion protein isoform X3

      See identical proteins and their annotated locations for XP_011796430.1

      UniProtKB/TrEMBL
      A0A2K5HDT2
      Conserved Domains (2) summary
      smart00157
      Location:23 → 240
      PRP; Major prion protein
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    5. XM_011941042.1 → XP_011796432.1  major prion protein isoform X3

      See identical proteins and their annotated locations for XP_011796432.1

      UniProtKB/TrEMBL
      A0A2K5HDT2
      Related
      ENSCANP00000002503.1, ENSCANT00000010311.1
      Conserved Domains (2) summary
      smart00157
      Location:23 → 240
      PRP; Major prion protein
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    6. XM_011941046.1 → XP_011796436.1  major prion protein isoform X7

      See identical proteins and their annotated locations for XP_011796436.1

      Conserved Domains (3) summary
      smart00157
      Location:23 → 224
      PRP; Major prion protein
      pfam00377
      Location:118 → 235
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    7. XM_011941047.1 → XP_011796437.1  major prion protein isoform X8

      Conserved Domains (3) summary
      smart00157
      Location:23 → 216
      PRP; Major prion protein
      pfam00377
      Location:110 → 227
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    8. XM_011941045.1 → XP_011796435.1  major prion protein isoform X6

      See identical proteins and their annotated locations for XP_011796435.1

      Conserved Domains (3) summary
      smart00157
      Location:23 → 224
      PRP; Major prion protein
      pfam00377
      Location:118 → 235
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    9. XM_011941043.1 → XP_011796433.1  major prion protein isoform X4

      Conserved Domains (3) summary
      smart00157
      Location:23 → 226
      PRP; Major prion protein
      pfam00377
      Location:120 → 237
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    10. XM_011941048.1 → XP_011796438.1  major prion protein isoform X9

      Conserved Domains (3) summary
      smart00157
      Location:23 → 215
      PRP; Major prion protein
      pfam00377
      Location:109 → 226
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal

    11. XM_011941044.1 → XP_011796434.1  major prion protein isoform X5

      Conserved Domains (3) summary
      smart00157
      Location:27 → 224
      PRP; Major prion protein
      pfam00377
      Location:118 → 235
      Prion; Prion/Doppel alpha-helical domain
      pfam11587
      Location:1 → 28
      Prion_bPrPp; Major prion protein bPrPp - N terminal
    Nucleotide Protein
    Heading Accession and Version

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