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    Optic atrophy 3 protein (OPA3) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824984, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Optic atrophy 3 protein (OPA3)
    Primary source
    TAIR:AT3G58150
    Locus tag
    AT3G58150
    See related
    Araport:AT3G58150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (21532813..21534135, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein Neighboring gene ncRNA Neighboring gene N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein Neighboring gene phenylalanyl-tRNA synthetase class IIc family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene tRNA-Gly Neighboring gene BET1P/SFT1P-like protein 14A Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115677.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Optic atrophy 3 protein (OPA3)
    NP_191374.2
    • Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT1G28510.1); Has 387 Blast hits to 383 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 117; Plants - 78; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21532813..21534135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115677.3 → NP_191374.2  Optic atrophy 3 protein (OPA3) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191374.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEA8, A0A384KNU5, A0A5S9XLV1, A0A654FIU4, F4J4P1, Q682L0
      Conserved Domains (2) summary
      PTZ00423
      Location:119 → 170
      PTZ00423; glideosome-associated protein 45; Provisional
      pfam07047
      Location:14 → 137
      OPA3; Optic atrophy 3 protein (OPA3)
    Nucleotide Protein
    Heading Accession and Version

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