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    P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839305, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT1G01910
    Locus tag
    AT1G01910
    See related
    Araport:AT1G01910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22M8.4; F22M8_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (313101..316090, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 5'-3' exonuclease family protein Neighboring gene tRNA-Lys Neighboring gene subtilase family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SET domain-containing protein Neighboring gene zinc finger protein-like protein Neighboring gene Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene armadillo repeat kinesin 2 Neighboring gene SEC7-like guanine nucleotide exchange family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Endoplasmic reticulum membrane receptors of the GET pathway are conserved throughout eukaryotes. Asseck LY, et al. Proc Natl Acad Sci U S A, 2021 Jan 5. PMID 33443185, Free PMC Article
    2. Loss of GET pathway orthologs in Arabidopsis thaliana causes root hair growth defects and affects SNARE abundance. Xing S, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096354, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035855.1
    NM_001083976.2
    NM_001123740.1
    NM_100071.3
    NM_179244.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within root hair elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GET complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region HDA PubMed 

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001030932.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001077445.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
    NP_001117212.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: anion transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_563640.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).
    NP_849575.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2854 Blast hits to 2413 proteins in 784 species: Archae - 172; Bacteria - 1905; Metazoa - 150; Fungi - 222; Plants - 105; Viruses - 0; Other Eukaryotes - 300 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      313101..316090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083976.2 → NP_001077445.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077445.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZR6, Q949M9
      UniProtKB/TrEMBL
      A0A178WPT5, Q9LPD0
      Conserved Domains (1) summary
      cl38936
      Location:35 → 311
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. NM_179244.2 → NP_849575.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849575.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZR6, Q949M9
      UniProtKB/TrEMBL
      A0A178WPT5, Q9LPD0
      Conserved Domains (1) summary
      cl38936
      Location:35 → 311
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. NM_001035855.1 → NP_001030932.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H5S5, Q9LPD0
      Conserved Domains (2) summary
      COG0003
      Location:30 → 302
      ArsA; Anion-transporting ATPase, ArsA/GET3 family [Inorganic ion transport and metabolism]
      cl21455
      Location:19 → 301
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    4. NM_100071.3 → NP_563640.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563640.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZR6, Q949M9
      UniProtKB/TrEMBL
      A0A178WPT5, Q9LPD0
      Conserved Domains (1) summary
      cl38936
      Location:35 → 311
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    5. NM_001123740.1 → NP_001117212.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117212.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HU77
      Conserved Domains (2) summary
      COG0003
      Location:24 → 206
      ArsA; Anion-transporting ATPase, ArsA/GET3 family [Inorganic ion transport and metabolism]
      cl21455
      Location:24 → 207
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q949M9.1

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