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    TTH_RS09205 DNA-directed RNA polymerase subunit beta [ Thermus thermophilus HB8 ]

    Gene ID: 3169736, updated on 12-Feb-2024

    Summary

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    Gene symbol
    TTH_RS09205
    Gene description
    DNA-directed RNA polymerase subunit beta
    Locus tag
    TTH_RS09205
    Gene type
    protein coding
    Organism
    Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
    Lineage
    Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
    Old locus tag
    TTHA1813
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_006461.1 (1694259..1697618, complement)

    Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene fuculose-1-phosphate aldolase Neighboring gene DNA-directed RNA polymerase subunit beta' Neighboring gene S4 domain-containing protein Neighboring gene rod shape-determining protein Neighboring gene 3-hydroxyacyl-ACP dehydratase FabZ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006461.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription. Li L, et al. Proc Natl Acad Sci U S A, 2020 Mar 17. PMID 32127479, Free PMC Article
    2. Dynamics of bridge helix bending in RNA polymerase II. Wang ZF, et al. Proteins, 2017 Apr. PMID 28056486
    3. Structural perspective on mutations affecting the function of multisubunit RNA polymerases. Trinh V, et al. Microbiol Mol Biol Rev, 2006 Mar. PMID 16524917, Free PMC Article
    4. The primary structure of Escherichia coli RNA polymerase. Nucleotide sequence of the rpoB gene and amino-acid sequence of the beta-subunit. Ovchinnikov YA, et al. Eur J Biochem, 1981 Jun 1. PMID 6266829

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Dynamics of bridge helix bending in RNA polymerase II has been reported.
      Title: Dynamics of bridge helix bending in RNA polymerase II.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit beta
    WP_011228935.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006461.1 Reference assembly

      Range
      1694259..1697618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011228935.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta [Thermus]

      See identical proteins and their annotated locations for WP_011228935.1

      UniProtKB/Swiss-Prot
      Q5SHB7, Q8RQE9
      Conserved Domains (1) summary
      PRK00405
      Location:1 → 1108
      rpoB; DNA-directed RNA polymerase subunit beta; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    2CW0_C.1
    2CW0_M.1
    2O5I_C.1
    2O5I_M.1
    2O5J_C.1
    2O5J_M.1
    2PPB_C.1
    2PPB_M.1
    3AOH_C.1
    3AOH_H.1
    3AOH_M.1
    3AOI_C.1
    3AOI_H.1
    3AOI_M.1
    3DXJ_C.1
    3DXJ_M.1
    3WOD_C.1
    4G7H_C.1
    4G7H_M.1
    4G7O_C.1
    4G7O_M.1
    4G7Z_C.1
    4G7Z_M.1
    4GZY_C.1
    4GZZ_C.1
    4MQ9_C.1
    4OIN_C.1
    4OIO_C.1
    4OIP_C.1
    4OIQ_C.1
    4OIR_C.1
    4Q4Z_C.1
    4Q5S_C.1
    4WQS_C.1
    4WQS_M.1
    4WQT_C.1
    4WQT_H.1
    4WQT_M.1
    5D4C_C.1
    5D4C_M.1
    5D4D_C.1
    5D4D_M.1
    5D4E_C.1
    5D4E_M.1
    5E17_C.1
    5E18_C.1
    5I2D_C.1
    5I2D_N.1
    5VO8_C.1
    5VOI_C.1
    5X21_C.1
    5X22_C.1
    5X22_M.1
    5XJ0_C.1
    6ASG_C.1
    6KQD_C.1
    6KQD_M.1
    6KQE_C.1
    6KQF_C.1
    6KQG_C.1
    6KQH_C.1
    6KQL_C.1
    6KQM_C.1
    6KQN_C.1
    6L74_C.1
    6LTS_C.1
    6M6A_C.1
    6M6B_C.1
    6M6C_C.1
    6OVR_C.1
    7EH0_C.1
    7EH1_C.1
    7EH2_C.1
    7EH2_M.1
    Q8RQE9.1