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    NAC085 NAC domain containing protein 85 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831300, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NAC085
    Official Full Name
    NAC domain containing protein 85
    Primary source
    TAIR:AT5G14490
    Locus tag
    AT5G14490
    See related
    Araport:AT5G14490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    anac085; NAC domain containing protein 85; T15N1.4
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    Genomic context

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    See NAC085 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (4670289..4672958, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GHMP kinase family protein Neighboring gene beta-1,4-N-acetylglucosaminyltransferase family protein Neighboring gene tRNA-Asp Neighboring gene aldose 1-epimerase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NAC domain containing protein 85
    NP_196953.1
    • NAC domain containing protein 85 (NAC085); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 44 (TAIR:AT3G01600.1); Has 2068 Blast hits to 2065 proteins in 64 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2068; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4670289..4672958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343338.1 → NP_001330342.1  NAC domain containing protein 85 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAI0

    2. NM_001343339.1 → NP_001330343.1  NAC domain containing protein 85 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAI4, A0A5S9Y6B3, A0A654G165
      Conserved Domains (1) summary
      pfam02365
      Location:59 → 199
      NAM; No apical meristem (NAM) protein

    3. NM_001343340.1 → NP_001330344.1  NAC domain containing protein 85 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BAI8, A0A7G2FDN9

    4. NM_121453.2 → NP_196953.1  NAC domain containing protein 85 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196953.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G165, Q9LY80
    Nucleotide Protein
    Heading Accession and Version

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