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    LOC122062631 vicilin-like antimicrobial peptides 2-3 [ Macadamia integrifolia ]

    Gene ID: 122062631, updated on 3-Dec-2024

    Summary

    Gene symbol
    LOC122062631
    Gene description
    vicilin-like antimicrobial peptides 2-3
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macadamia integrifolia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Macadamia
    Also known as
    AMP2; AMP2-1; AMP2-2; AMP2-3; MiAMP2
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    Genomic context

    See LOC122062631 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current SCU_Mint_v3 (GCF_013358625.1) Unplaced Scaffold NW_024868077.1 (487066..489425, complement)

    NW_024868077.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122062621 Neighboring gene vicilin-like antimicrobial peptides 2-3 Neighboring gene vicilin Jug r 6.0101-like Neighboring gene thioredoxin-like protein HCF164, chloroplastic

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_024868077 Unplaced Scaffold Reference SCU_Mint_v3 Primary Assembly

    General protein information

    Preferred Names
    vicilin-like antimicrobial peptides 2-1; vicilin-like antimicrobial peptides 2-3
    Names
    Vicilin-like antimicrobial peptides 2-1
    Vicilin-like antimicrobial peptides 2-2
    vicilin
    vicilin-like protein Mac i 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001406458.1NP_001393387.1  vicilin-like antimicrobial peptides 2-1 precursor

      Status: VALIDATED

      Source sequence(s)
      AF161883, AF161885, JAAEEG010000026
      UniProtKB/Swiss-Prot
      Q9SPL5

    RefSeqs of Annotated Genomes: Macadamia integrifolia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SCU_Mint_v3 Primary Assembly

    Genomic

    1. NW_024868077.1 Reference SCU_Mint_v3 Primary Assembly

      Range
      487066..489425 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042626281.1XP_042482215.1  vicilin-like antimicrobial peptides 2-3

      Conserved Domains (3) summary
      pfam04702
      Location:70243
      Vicilin_N; Vicilin N terminal region
      cd02244
      Location:262437
      cupin_7S_vicilin-like_N; 7S vicilin seed storage globulin, N-terminal cupin domain
      cd02245
      Location:462634
      cupin_7S_vicilin-like_C; 7S vicilin seed storage globulin, C-terminal cupin domain