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    Pngl N-glycanase Pngl [ Harpegnathos saltator (Jerdon's jumping ant) ]

    Gene ID: 105182339, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Pngl
    Gene description
    N-glycanase Pngl
    Locus tag
    EAI_14826
    See related
    EnsemblRapid:LOC105182339
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Harpegnathos saltator
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Harpegnathos
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See Pngl in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Hsal_v8.5 (GCF_003227715.1) Unplaced Scaffold NW_020229895.1 (753783..756885)
    101 previous assembly HarSal_1.0 (GCF_000147195.1) Unplaced Scaffold NW_011649196.1 (647626..650729, complement)

    NW_020229895.1Genomic Context describing neighboring genes Neighboring gene pickpocket protein 28 Neighboring gene integrin linked kinase Neighboring gene venom carboxylesterase-6 Neighboring gene venom carboxylesterase-6 Neighboring gene mutator 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycoprotein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deglycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Harpegnathos saltator Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Hsal_v8.5

    Genomic

    1. NW_020229895.1 Reference Hsal_v8.5

      Range
      753783..756885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011139688.3 → XP_011137990.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

      See identical proteins and their annotated locations for XP_011137990.1

      UniProtKB/TrEMBL
      E2BFU3
      Related
      XP_011137990.1, XM_011139688.3
      Conserved Domains (5) summary
      cd10459
      Location:9 → 99
      PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
      COG1305
      Location:255 → 313
      YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
      pfam01841
      Location:230 → 307
      Transglut_core; Transglutaminase-like superfamily
      pfam03835
      Location:291 → 355
      Rad4; Rad4 transglutaminase-like domain
      pfam04721
      Location:421 → 629
      PAW; PNGase C-terminal domain, mannose-binding module PAW
    Nucleotide Protein Strain
    Heading Accession and Version

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