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    ZACN zinc activated ion channel [ Bison bison bison ]

    Gene ID: 105000556, updated on 13-Mar-2024

    Summary

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    Gene symbol
    ZACN
    Gene description
    zinc activated ion channel
    See related
    Ensembl:ENSBBBG00000000677
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bison bison bison (sub-species: bison)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
    Orthologs
    human all
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    Genomic context

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    See ZACN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494943.1 (7784663..7789392)

    NW_011494943.1Genomic Context describing neighboring genes Neighboring gene signal recognition particle 68 Neighboring gene galanin receptor 2 Neighboring gene exocyst complex component 7 Neighboring gene forkhead box J1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011494943.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc-activated ligand-gated ion channel

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bison_UMD1.0 Primary Assembly

    Genomic

    1. NW_011494943.1 Reference Bison_UMD1.0 Primary Assembly

      Range
      7784663..7789392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010856507.1 → XP_010854809.1  zinc-activated ligand-gated ion channel

      UniProtKB/TrEMBL
      A0A6P3IRW1
      Related
      ENSBBBP00000012649.1, ENSBBBT00000022401.1
      Conserved Domains (1) summary
      pfam02931
      Location:70 → 222
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    Nucleotide Protein
    Heading Accession and Version

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