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    AGGF1 angiogenic factor with G-patch and FHA domains 1 [ Bison bison bison ]

    Gene ID: 104994147, updated on 12-Mar-2024

    Summary

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    Gene symbol
    AGGF1
    Gene description
    angiogenic factor with G-patch and FHA domains 1
    See related
    Ensembl:ENSBBBG00000021443
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bison bison bison (sub-species: bison)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
    Orthologs
    human mouse all
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    Genomic context

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    See AGGF1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494824.1 (2478142..2525158)

    NW_011494824.1Genomic Context describing neighboring genes Neighboring gene ZZ-type zinc finger-containing protein 3-like Neighboring gene corticotropin releasing hormone binding protein Neighboring gene uncharacterized LOC104994148 Neighboring gene phosphodiesterase 8B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011494824.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    angiogenic factor with G patch and FHA domains 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bison_UMD1.0 Primary Assembly

    Genomic

    1. NW_011494824.1 Reference Bison_UMD1.0 Primary Assembly

      Range
      2478142..2525158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010847619.1 → XP_010845921.1  angiogenic factor with G patch and FHA domains 1

      See identical proteins and their annotated locations for XP_010845921.1

      UniProtKB/TrEMBL
      A0A6P3HTM5
      Related
      ENSBBBP00000013750.1, ENSBBBT00000023984.1
      Conserved Domains (4) summary
      COG1716
      Location:422 → 510
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:408 → 514
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam01585
      Location:618 → 659
      G-patch; G-patch domain
      cd16164
      Location:198 → 251
      OCRE_VG5Q; OCRE domain found in angiogenic factor VG5Q and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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