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    LOC104867186 serum basic protease inhibitor-like [ Fukomys damarensis (Damara mole-rat) ]

    Gene ID: 104867186, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104867186
    Gene description
    serum basic protease inhibitor-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fukomys damarensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
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    Genomic context

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    See LOC104867186 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900934.1 (14504787..14508421, complement)
    101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045071.1 (5646474..5650108)

    NW_022900934.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene MICOS complex subunit MIC27-like Neighboring gene cyclin-J-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serum basic protease inhibitor-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DMR_v1.0_HiC Primary Assembly

    Genomic

    1. NW_022900934.1 Reference DMR_v1.0_HiC Primary Assembly

      Range
      14504787..14508421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010631496.1 → XP_010629798.1  serum basic protease inhibitor-like

      Conserved Domains (1) summary
      cd00109
      Location:35 → 87
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.
    Nucleotide Protein
    Heading Accession and Version

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