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    RpS20 Ribosomal protein S20 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42464, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpS20provided by FlyBase
    Official Full Name
    Ribosomal protein S20provided by FlyBase
    Primary source
    FLYBASE:FBgn0019936
    Locus tag
    Dmel_CG15693
    See related
    AllianceGenome:FB:FBgn0019936
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey111; anon-EST:Posey122; anon-EST:Posey147; CG15693; Dmel\CG15693; rps20; Rps20; S10
    Summary
    A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPS20 (ribosomal protein S20). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpS20 in Genome Data Viewer
    Location:
    93A1-93A1; 3-69 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20822181..20823356)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16647903..16649078)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Adenylosuccinate synthetase Neighboring gene antisense RNA:CR44047 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of the gene for Drosophila S20 ribosomal protein. Chan HY, et al. Gene, 1997 Oct 24. PMID 9373141
    2. In vivo evidence for homeostatic regulation of ribosomal protein levels in Drosophila. Kitamura D, et al. Cell Struct Funct, 2024 Feb 16. PMID 38199250, Free PMC Article
    3. The Unfolded Protein Response Triggers Site-Specific Regulatory Ubiquitylation of 40S Ribosomal Proteins. Higgins R, et al. Mol Cell, 2015 Jul 2. PMID 26051182, Free PMC Article
    4. Premature termination codon readthrough in Drosophila varies in a developmental and tissue-specific manner. Chen Y, et al. Sci Rep, 2020 May 22. PMID 32444687, Free PMC Article
    5. Evaluation of potential reference genes for reverse transcription-qPCR studies of physiological responses in Drosophila melanogaster. Ponton F, et al. J Insect Physiol, 2011 Jun. PMID 21435341

    See all (67) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosolic ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of small ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein S20
    Names
    CG15693-PA
    RpS20-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      20822181..20823356
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079697.3 → NP_524421.1  ribosomal protein S20 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524421.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P55828, Q8SYS0, Q9VDI4
      UniProtKB/TrEMBL
      A0A1B2AL12
      Related
      FBpp0083371
      Conserved Domains (1) summary
      cl00314
      Location:6 → 118
      Ribosomal_S10; Ribosomal protein S10p/S20e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P55828.1 P55828

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