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    LOC104749774 oxysterol-binding protein-related protein 1A-like [ Camelina sativa (false flax) ]

    Gene ID: 104749774, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC104749774
    Gene description
    oxysterol-binding protein-related protein 1A-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelina sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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    Genomic context

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    See LOC104749774 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Cs (GCF_000633955.1) 16 NC_025700.1 (4698339..4701461, complement)

    Chromosome 16 - NC_025700.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104753371 Neighboring gene uncharacterized LOC109129439 Neighboring gene serine/threonine-protein kinase EDR1-like Neighboring gene uncharacterized LOC104749776

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025700.1 Chromosome 16 Reference Cs

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    oxysterol-binding protein-related protein 1A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cs

    Genomic

    1. NC_025700.1 Reference Cs

      Range
      4698339..4701461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010471469.1 → XP_010469771.1  oxysterol-binding protein-related protein 1A-like isoform X1

      Conserved Domains (3) summary
      cd13294
      Location:106 → 243
      PH_ORP_plant; Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain
      pfam00169
      Location:106 → 234
      PH; PH domain
      pfam01237
      Location:425 → 770
      Oxysterol_BP; Oxysterol-binding protein

    2. XM_010471470.1 → XP_010469772.1  oxysterol-binding protein-related protein 1A-like isoform X2

      Conserved Domains (3) summary
      cd13294
      Location:106 → 243
      PH_ORP_plant; Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain
      pfam00169
      Location:106 → 234
      PH; PH domain
      pfam01237
      Location:398 → 743
      Oxysterol_BP; Oxysterol-binding protein
    Nucleotide Protein
    Heading Accession and Version

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