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    LOC104422156 DELLA protein GAI [ Eucalyptus grandis ]

    Gene ID: 104422156, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC104422156
    Gene description
    DELLA protein GAI
    Locus tag
    EUGRSUZ_J01594
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eucalyptus grandis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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    Genomic context

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    See LOC104422156 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current ASM1654582v1 (GCF_016545825.1) 10 NC_052621.1 (19965003..19967488, complement)
    101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092447.1 (20846273..20848839, complement)

    Chromosome 10 - NC_052621.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104422155 Neighboring gene uncharacterized LOC108955788 Neighboring gene glutathione S-transferase DHAR3, chloroplastic Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hyperosmotic salinity response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in jasmonic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gibberellic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of seed germination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of reactive oxygen species metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of seed dormancy process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to abscisic acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ethylene IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in salicylic acid mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DELLA protein GAI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1654582v1 Primary Assembly

    Genomic

    1. NC_052621.1 Reference ASM1654582v1 Primary Assembly

      Range
      19965003..19967488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010034394.3 → XP_010032696.1  DELLA protein GAI

      See identical proteins and their annotated locations for XP_010032696.1

      UniProtKB/TrEMBL
      A0A059AEG8
      Conserved Domains (2) summary
      pfam03514
      Location:259 → 621
      GRAS; GRAS domain family
      pfam12041
      Location:65 → 132
      DELLA; Transcriptional regulator DELLA protein N terminal
    Nucleotide Protein
    Heading Accession and Version

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