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    PNO1 partner of NOB1 homolog [ Chaetura pelagica (chimney swift) ]

    Gene ID: 104385068, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PNO1
    Gene description
    partner of NOB1 homolog
    Locus tag
    M959_10796
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chaetura pelagica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
    Orthologs
    human mouse all
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    Genomic context

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    See PNO1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952566.1 (2994607..3000031)

    NW_009952566.1Genomic Context describing neighboring genes Neighboring gene C1D nuclear receptor corepressor Neighboring gene dynein axonemal assembly factor 10 Neighboring gene protein phosphatase 3 regulatory subunit B, alpha Neighboring gene cannabinoid receptor interacting protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009952566.1 Unplaced Scaffold Reference ChaPel_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein PNO1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ChaPel_1.0

    Genomic

    1. NW_009952566.1 Reference ChaPel_1.0

      Range
      2994607..3000031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009993470.1 → XP_009991772.1  RNA-binding protein PNO1

      Conserved Domains (2) summary
      smart00322
      Location:152 → 204
      KH; K homology RNA-binding domain
      COG1094
      Location:49 → 226
      Krr1; rRNA processing protein Krr1/Pno1, contains KH domain [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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