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    LOC104334747 uncharacterized LOC104334747 [ Opisthocomus hoazin ]

    Gene ID: 104334747, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC104334747
    Gene description
    uncharacterized LOC104334747
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Opisthocomus hoazin
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
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    Genomic context

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    See LOC104334747 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009899717.1 (237523..341922, complement)

    NW_009899717.1Genomic Context describing neighboring genes Neighboring gene myeloperoxidase-like Neighboring gene TSPO associated protein 1 Neighboring gene myotubularin related protein 4 Neighboring gene caspase-1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009899717.1 Unplaced Scaffold Reference ASM69207v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Wnt receptor catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC104334747

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69207v1

    Genomic

    1. NW_009899717.1 Reference ASM69207v1

      Range
      237523..341922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009940411.1 → XP_009938713.1  uncharacterized protein LOC104334747

      Conserved Domains (3) summary
      pfam00447
      Location:122 → 203
      HSF_DNA-bind; HSF-type DNA-binding
      pfam13639
      Location:902 → 966
      zf-RING_2; Ring finger domain
      cl12033
      Location:971 → 1002
      Spt4; Transcription elongation factor Spt4
    Nucleotide Protein
    Heading Accession and Version

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