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    OT_ostta14g01570 Major facilitator superfamily domain, general substrate transporter [ Ostreococcus tauri ]

    Gene ID: 9837898, updated on 16-Nov-2023

    Summary

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    Gene symbol
    OT_ostta14g01570
    Gene description
    Major facilitator superfamily domain, general substrate transporter
    Locus tag
    OT_ostta14g01570
    Gene type
    protein coding
    RNA name
    Major facilitator superfamily domain, general substrate transporter
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus tauri (strain: RCC4221)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
    Old locus tag
    Ot14g01870
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    Genomic context

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    See OT_ostta14g01570 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    1
    Sequence:
    Chromosome: 14; NC_014439.2 (284924..286777, complement)

    Chromosome 14 - NC_014439.2Genomic Context describing neighboring genes Neighboring gene Transcription factor CBF/NF-Y/archaeal histone Neighboring gene RNA polymerase Rpb7, N-terminal Neighboring gene Peptidase M32, carboxypeptidase Taq metallopeptidase Neighboring gene Domain of unknown function DUF4485

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014439.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
    2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables myo-inositol:proton symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    Major facilitator superfamily domain, general substrate transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014439.2 Reference assembly

      Range
      284924..286777 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022982562.1 → XP_022841338.1  Major facilitator superfamily domain, general substrate transporter [Ostreococcus tauri]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A096PAR5, A0A1Y5IFP1
      Conserved Domains (1) summary
      cl26863
      Location:91 → 604
      Sugar_tr; Sugar (and other) transporter
    Nucleotide Protein
    Heading Accession and Version

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