U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    mpp4a MAGUK p55 scaffold protein 4a [ Danio rerio (zebrafish) ]

    Gene ID: 100535324, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    mpp4aprovided by ZNC
    Official Full Name
    MAGUK p55 scaffold protein 4aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-523
    See related
    Ensembl:ENSDARG00000058222 AllianceGenome:ZFIN:ZDB-GENE-070912-523
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-33m14.4
    Summary
    Predicted to be located in membrane. Predicted to be active in adherens junction and plasma membrane. Orthologous to human MPP4 (MAGUK p55 scaffold protein 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See mpp4a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (13681965..13714118)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (13711059..13743185)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene alsin Rho guanine nucleotide exchange factor ALS2 a Neighboring gene transmembrane protein 237a Neighboring gene abl-interactor 2a Neighboring gene uncharacterized LOC137496457

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in adherens junction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    MAGUK p55 subfamily member 4
    Names
    membrane palmitoylated protein 4a
    membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4)
    mpp4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      13681965..13714118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068223563.1 → XP_068079664.1  MAGUK p55 subfamily member 4 isoform X3

    2. XM_021478856.2 → XP_021334531.1  MAGUK p55 subfamily member 4 isoform X2

      UniProtKB/TrEMBL
      A0A8M9PSE8
      Conserved Domains (5) summary
      smart00569
      Location:24 → 76
      L27; domain in receptor targeting proteins Lin-2 and Lin-7
      smart00228
      Location:147 → 230
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      pfam02828
      Location:84 → 133
      L27; L27 domain
      cl17036
      Location:241 → 300
      SH3; Src Homology 3 domain superfamily
      cl27059
      Location:418 → 609
      Guanylate_kin; Guanylate kinase

    3. XM_021478855.2 → XP_021334530.1  MAGUK p55 subfamily member 4 isoform X1

      UniProtKB/TrEMBL
      A0A286Y9N6, A0A8M3AVU8
      Related
      ENSDARP00000143320.1, ENSDART00000175639.2
      Conserved Domains (5) summary
      smart00569
      Location:24 → 76
      L27; domain in receptor targeting proteins Lin-2 and Lin-7
      smart00228
      Location:147 → 230
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      pfam02828
      Location:84 → 133
      L27; L27 domain
      cl17036
      Location:241 → 300
      SH3; Src Homology 3 domain superfamily
      cl27059
      Location:419 → 610
      Guanylate_kin; Guanylate kinase

    RNA

    1. XR_011016797.1 RNA Sequence

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394743.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      412498..444651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068218533.1 → XP_068074634.1  MAGUK p55 subfamily member 4 isoform X3

    2. XM_021472139.2 → XP_021327814.1  MAGUK p55 subfamily member 4 isoform X2

      UniProtKB/TrEMBL
      A0A8M9PSE8
      Conserved Domains (5) summary
      smart00569
      Location:24 → 76
      L27; domain in receptor targeting proteins Lin-2 and Lin-7
      smart00228
      Location:147 → 230
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      pfam02828
      Location:84 → 133
      L27; L27 domain
      cl17036
      Location:241 → 300
      SH3; Src Homology 3 domain superfamily
      cl27059
      Location:418 → 609
      Guanylate_kin; Guanylate kinase

    3. XM_009304537.4 → XP_009302812.1  MAGUK p55 subfamily member 4 isoform X1

      UniProtKB/TrEMBL
      A0A286Y9N6, A0A8M3AVU8
      Conserved Domains (5) summary
      smart00569
      Location:24 → 76
      L27; domain in receptor targeting proteins Lin-2 and Lin-7
      smart00228
      Location:147 → 230
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      pfam02828
      Location:84 → 133
      L27; L27 domain
      cl17036
      Location:241 → 300
      SH3; Src Homology 3 domain superfamily
      cl27059
      Location:419 → 610
      Guanylate_kin; Guanylate kinase

    RNA

    1. XR_011009759.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools