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    GRAMD4 GRAM domain containing 4 [ Aptenodytes forsteri (emperor penguin) ]

    Gene ID: 103906950, updated on 14-Nov-2024

    Summary

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    Gene symbol
    GRAMD4
    Gene description
    GRAM domain containing 4
    Locus tag
    AS27_01668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aptenodytes forsteri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
    Orthologs
    human mouse all
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    Genomic context

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    See GRAMD4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796221.1 (1952482..2010856, complement)

    NW_008796221.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 22A Neighboring gene ceramide kinase Neighboring gene histone H2B 5 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008796221.1 Unplaced Scaffold Reference ASM69914v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of toll-like receptor 9 signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GRAM domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69914v1

    Genomic

    1. NW_008796221.1 Reference ASM69914v1

      Range
      1952482..2010856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009289014.2 → XP_009287289.1  GRAM domain-containing protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A087RKN2
      Conserved Domains (2) summary
      cd13221
      Location:473 → 578
      PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam15233
      Location:73 → 148
      SYCE1; Synaptonemal complex central element protein 1

    2. XM_009289015.2 → XP_009287290.1  GRAM domain-containing protein 4 isoform X2

      See identical proteins and their annotated locations for XP_009287290.1

      UniProtKB/TrEMBL
      A0A087RKN2
      Conserved Domains (2) summary
      cd13221
      Location:461 → 566
      PH-GRAM_GRAMDC4; GRAM domain-containing protein 4 (GRAMDC4) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam15233
      Location:73 → 148
      SYCE1; Synaptonemal complex central element protein 1
    Nucleotide Protein
    Heading Accession and Version

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