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    LOC103873911 probable 20S rRNA accumulation protein 4 [ Brassica rapa (field mustard) ]

    Gene ID: 103873911, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103873911
    Gene description
    probable 20S rRNA accumulation protein 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103873911 in Genome Data Viewer
    Location:
    chromosome: A6
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A06 NC_024800.2 (19639294..19641193, complement)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A6 NC_024800.1 (15025014..15026863, complement)

    Chromosome A06 - NC_024800.2Genomic Context describing neighboring genes Neighboring gene small GTPase LIP1 Neighboring gene uncharacterized protein At5g64816 Neighboring gene uncharacterized LOC103873909 Neighboring gene uncharacterized LOC103873912 Neighboring gene transfer RNA leucine (anticodon AAG)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable 20S rRNA accumulation protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024800.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      19639294..19641193 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009152316.3 → XP_009150564.1  probable 20S rRNA accumulation protein 4

      UniProtKB/TrEMBL
      A0A397Z2H0
      Conserved Domains (1) summary
      pfam04194
      Location:241 → 360
      PDCD2_C; Programmed cell death protein 2, C-terminal putative domain
    Nucleotide Protein
    Heading Accession and Version

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