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    FANCL FA complementation group L [ Buceros rhinoceros silvestris ]

    Gene ID: 104500632, updated on 3-Aug-2024

    Summary

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    Gene symbol
    FANCL
    Gene description
    FA complementation group L
    Locus tag
    N320_10119
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Buceros rhinoceros silvestris (sub-species: silvestris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucerotidae; Buceros
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See FANCL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM71030v1 (GCF_000710305.1) Unplaced Scaffold NW_010434037.1 (39650..60728, complement)

    NW_010434037.1Genomic Context describing neighboring genes Neighboring gene VRK serine/threonine kinase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010434037.1 Unplaced Scaffold Reference ASM71030v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein monoubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Fanconi anaemia nuclear complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase FANCL
    Names
    Fanconi anemia complementation group L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Buceros rhinoceros silvestris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM71030v1

    Genomic

    1. NW_010434037.1 Reference ASM71030v1

      Range
      39650..60728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010144310.1 → XP_010142612.1  E3 ubiquitin-protein ligase FANCL

      UniProtKB/TrEMBL
      A0A091HG30
      Conserved Domains (2) summary
      pfam09765
      Location:1 → 222
      WD-3; WD-repeat region
      pfam11793
      Location:230 → 298
      FANCL_C; FANCL C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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