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    EHI_172960 ARP2/3 complex 21 kDa subunit, putative [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3401933, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_172960
    Gene description
    ARP2/3 complex 21 kDa subunit, putative
    Locus tag
    EHI_172960
    See related
    AmoebaDB:EHI_172960; VEuPathDB:EHI_172960
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    836.t00001
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    Genomic context

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    See EHI_172960 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_001915015.1Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene uncharacterized protein Neighboring gene coatomer subunit beta, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001915015.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ARP2/3 complex 21 kDa subunit, putative
    XP_647903.1
    • encoded by transcript EHI_172960A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001915015.1 Reference assembly

      Range
      7208..7815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_642811.2 → XP_647903.1  ARP2/3 complex 21 kDa subunit, putative [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_647903.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JUH2, C4M6H6
      Conserved Domains (1) summary
      pfam04062
      Location:6 → 176
      P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit
    Nucleotide Protein
    Heading Accession and Version

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