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    CG17321 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35144, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG17321provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032719
    Locus tag
    Dmel_CG17321
    See related
    AllianceGenome:FB:FBgn0032719
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG17321
    Summary
    Predicted to be active in membrane. Is expressed in several structures, including dorsal epidermis primordium; embryonic dorsal epidermis; embryonic epipharynx; embryonic hypopharynx; and ganglia. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG17321 in Genome Data Viewer
    Location:
    37B1-37B1; 2-54 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18845184..18855110)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18845184..18855110)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L13 Neighboring gene tailup Neighboring gene mir-4946 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic regulatory blocks underlie extensive microsynteny conservation in insects. Engström PG, et al. Genome Res, 2007 Dec. PMID 17989259, Free PMC Article
    2. Endogenously imprinted genes in Drosophila melanogaster. McEachern LA, et al. Mol Genet Genomics, 2014 Aug. PMID 24658702
    3. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
    4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG17321-PA
    CG17321-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      18845184..18855110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299138.1 → NP_001286067.1  uncharacterized protein Dmel_CG17321, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286067.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ40
      Conserved Domains (1) summary
      pfam01284
      Location:103 → 238
      MARVEL; Membrane-associating domain

    2. NM_136071.3 → NP_609915.1  uncharacterized protein Dmel_CG17321, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609915.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ40
      Related
      FBpp0080660
      Conserved Domains (1) summary
      pfam01284
      Location:103 → 238
      MARVEL; Membrane-associating domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VJ40 Q9VJ40

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