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    cgd8_3330 hypothetical protein [ Cryptosporidium parvum Iowa II ]

    Gene ID: 3374252, updated on 17-May-2024

    Summary

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    Gene symbol
    cgd8_3330
    Gene description
    hypothetical protein
    Locus tag
    cgd8_3330
    See related
    ApiDB_CryptoDB:cgd8_3330; CryptoDB:cgd8_3330; VEuPathDB:cgd8_3330
    Gene type
    protein coding
    RNA name
    conserved hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Cryptosporidium parvum Iowa II (isolate: Iowa type II)
    Lineage
    Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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    Genomic context

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    See cgd8_3330 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Sequence:
    Chromosome: 8; NC_006987.1 (855603..856034, complement)

    Chromosome 8 - NC_006987.1Genomic Context describing neighboring genes Neighboring gene S. cerevisiae Ylr022cp like protein that has a C2H2 zinc finger and is a component of the exosome Neighboring gene phenylalanyl-tRNA synthetase beta chain Neighboring gene PWI domain containing protein that is typically seen in spliceosomal proteins Neighboring gene oocyst wall protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006987.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_627228.1
    • highly conserved small protein, similar to translation initiation factor eIF-1A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006987.1 Reference assembly

      Range
      855603..856034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_627228.1 → XP_627228.1  hypothetical protein [Cryptosporidium parvum Iowa II]

      See identical proteins and their annotated locations for XP_627228.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7S7LEM0, Q5CVP1
      Conserved Domains (1) summary
      PTZ00329
      Location:1 → 141
      PTZ00329; eukaryotic translation initiation factor 1A; Provisional
    Nucleotide Protein
    Heading Accession and Version

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