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    Optic atrophy 3 protein (OPA3) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839751, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Optic atrophy 3 protein (OPA3)
    Primary source
    TAIR:AT1G28510
    Locus tag
    AT1G28510
    See related
    Araport:AT1G28510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3M18.5; F3M18_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (10023817..10026311)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene syntaxin of plants 61 Neighboring gene hypothetical protein (DUF626) Neighboring gene vascular plant one zinc finger protein Neighboring gene deneddylase Neighboring gene uncharacterized protein Neighboring gene RAB GTPase homolog A1I

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_102619.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Optic atrophy 3 protein (OPA3)
    NP_564311.1
    • Optic atrophy 3 protein (OPA3); CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: Optic atrophy 3 protein (OPA3) (TAIR:AT3G58150.1); Has 397 Blast hits to 393 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 155; Fungi - 114; Plants - 80; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10023817..10026311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102619.4 → NP_564311.1  Optic atrophy 3 protein (OPA3) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564311.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W557, A0A654EDP4, Q9SGP9
      Conserved Domains (1) summary
      pfam07047
      Location:3 → 126
      OPA3; Optic atrophy 3 protein (OPA3)
    Nucleotide Protein
    Heading Accession and Version

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