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    SP1L3 SPIRAL1-like3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821277, updated on 18-Sep-2024

    Summary

    Official Symbol
    SP1L3
    Official Full Name
    SPIRAL1-like3
    Primary source
    TAIR:AT3G02180
    Locus tag
    AT3G02180
    See related
    Araport:AT3G02180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C9.3; SPIRAL1-like3
    Summary
    SPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
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    Genomic context

    See SP1L3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (404432..405713)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plastid transcription factor 1 Neighboring gene Bromodomain transcription factor Neighboring gene longifolia2 Neighboring gene Ribosomal protein L39 family protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene COBRA-like protein 1 precursor

    General gene information

    NM_001125082.1
    NM_111085.4
    NM_202480.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cortical microtubule organization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

    Preferred Names
    SPIRAL1-like3
    NP_001118554.1
    • SPIRAL1-like3 (SP1L3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like4 (TAIR:AT5G15600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_566166.1
    • SPIRAL1-like3 (SP1L3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like4 (TAIR:AT5G15600.1); Has 418 Blast hits to 329 proteins in 68 species: Archae - 2; Bacteria - 13; Metazoa - 50; Fungi - 15; Plants - 147; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink).
    NP_974209.1
    • SPIRAL1-like3 (SP1L3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like4 (TAIR:AT5G15600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      404432..405713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111085.4NP_566166.1  SPIRAL1-like3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566166.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7P8
      UniProtKB/TrEMBL
      A0A178VFA1, A0A5S9X8X3
    2. NM_001125082.1NP_001118554.1  SPIRAL1-like3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118554.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H6W7
    3. NM_202480.3NP_974209.1  SPIRAL1-like3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974209.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7P8
      UniProtKB/TrEMBL
      A0A178VFA1, A0A5S9X8X3