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    LOC100573090 uncharacterized LOC100573090 [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100573090, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100573090
    Gene description
    uncharacterized LOC100573090
    See related
    EnsemblRapid:LOC100573090
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
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    Genomic context

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    See LOC100573090 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (122293361..122319210)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383520.1 (1948861..1974627)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene protein FAM76A Neighboring gene popeye domain-containing protein 3-like Neighboring gene vesicle trafficking 1 Neighboring gene uncharacterized LOC107882212 Neighboring gene 5.8S ribosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cAMP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100573090

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      122293361..122319210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008191832.3 → XP_008190054.1  uncharacterized protein LOC100573090

      See identical proteins and their annotated locations for XP_008190054.1

      UniProtKB/TrEMBL
      A0A8R2JQT3
      Related
      XP_008190054.1, XM_008191832.3
      Conserved Domains (1) summary
      pfam04831
      Location:131 → 358
      Popeye; Popeye protein conserved region

    2. XM_029488190.1 → XP_029344050.1  uncharacterized protein LOC100573090

      UniProtKB/TrEMBL
      A0A8R2JQT3
      Related
      XP_029344050.1, XM_029488190.1
      Conserved Domains (1) summary
      pfam04831
      Location:131 → 358
      Popeye; Popeye protein conserved region

    3. XM_029488189.1 → XP_029344049.1  uncharacterized protein LOC100573090

      UniProtKB/TrEMBL
      A0A8R2JQT3
      Related
      XP_029344049.1, XM_029488189.1
      Conserved Domains (1) summary
      pfam04831
      Location:131 → 358
      Popeye; Popeye protein conserved region
    Nucleotide Protein
    Heading Accession and Version

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