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    LOC100586798 non-secretory ribonuclease [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100586798, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC100586798
    Gene description
    non-secretory ribonuclease
    See related
    EnsemblRapid:ENSNLEG00000048303
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Also known as
    EDN; RAF1; RNS2; RNASE2
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    Genomic context

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    See LOC100586798 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) Unplaced Scaffold NW_022096178.1 (57189..90975, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 22a NC_019837.1 (43321477..43322458, complement)

    NW_022096178.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115833842

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic analysis of eutherian ribonuclease A genes. Premzl M. Mol Genet Genomics, 2014 Apr. PMID 24337645
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA nuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response in mucosa IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    non-secretory ribonuclease
    Names
    Eosinophil-derived neurotoxin
    RNase 2
    RNase UpI-2
    Ribonuclease 2
    Ribonuclease US
    ribonuclease A F1
    ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NW_022096178.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      57189..90975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030808661.1 → XP_030664521.1  non-secretory ribonuclease

      UniProtKB/Swiss-Prot
      Q8SPY8
      Related
      ENSNLEP00000053534.1, ENSNLET00000062323.1

    2. XM_030808660.1 → XP_030664520.1  non-secretory ribonuclease

      UniProtKB/Swiss-Prot
      Q8SPY8
      Related
      ENSNLEP00000060243.1, ENSNLET00000077147.1
      Conserved Domains (1) summary
      smart00092
      Location:31 → 161
      RNAse_Pc; Pancreatic ribonuclease

    3. XM_030808662.1 → XP_030664522.1  non-secretory ribonuclease

      UniProtKB/Swiss-Prot
      Q8SPY8
      Conserved Domains (1) summary
      smart00092
      Location:31 → 161
      RNAse_Pc; Pancreatic ribonuclease

    4. XM_030808663.1 → XP_030664523.1  non-secretory ribonuclease

      UniProtKB/Swiss-Prot
      Q8SPY8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SPY8.1 GenPept UniProtKB/Swiss-Prot:Q8SPY8

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