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    A1O5_05554 uncharacterized protein [ Cladophialophora psammophila CBS 110553 ]

    Gene ID: 19190271, updated on 31-Oct-2024

    Summary

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    Gene symbol
    A1O5_05554
    Gene description
    uncharacterized protein
    Locus tag
    A1O5_05554
    See related
    FungiDB:A1O5_05554; VEuPathDB:A1O5_05554
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cladophialophora psammophila CBS 110553 (strain: CBS 110553, culture-collection: CBS:110553, type-material: culture from type material of Cladophialophora psammophila)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Cladophialophora
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See A1O5_05554 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_006912928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Ca2+:H+ antiporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006912928.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006912928.1 Reference assembly

      Range
      1458708..1460808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007746154.1 → XP_007744344.1  uncharacterized protein A1O5_05554 [Cladophialophora psammophila CBS 110553]

      See identical proteins and their annotated locations for XP_007744344.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W9X351
      Conserved Domains (2) summary
      COG0724
      Location:204 → 328
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12307
      Location:249 → 322
      RRM_NIFK_like; RNA recognition motif in nucleolar protein interacting with the FHA domain of pKI-67 (NIFK) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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