U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    MLLT6 MLLT6, PHD finger containing [ Myotis davidii ]

    Gene ID: 102763929, updated on 30-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    MLLT6
    Gene description
    MLLT6, PHD finger containing
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myotis davidii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MLLT6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006298628.1 (3964326..3990497)

    NW_006298628.1Genomic Context describing neighboring genes Neighboring gene SRC kinase signaling inhibitor 1 Neighboring gene uncharacterized LOC107184758 Neighboring gene uncharacterized LOC102763641 Neighboring gene polycomb group ring finger 2 Neighboring gene proteasome 20S subunit beta 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_006298628.1 Unplaced Scaffold Reference ASM32734v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2 iron, 2 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein AF-17
    Names
    MLLT6, PHD finger domain containing
    myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM32734v1

    Genomic

    1. NW_006298628.1 Reference ASM32734v1

      Range
      3964326..3990497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006774278.2 → XP_006774341.1  protein AF-17 isoform X6

      Conserved Domains (2) summary
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily

    2. XM_006774279.2 → XP_006774342.1  protein AF-17 isoform X7

      Conserved Domains (3) summary
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily
      cl23880
      Location:673 → 699
      HALZ; Homeobox associated leucine zipper

    3. XM_015570882.1 → XP_015426368.1  protein AF-17 isoform X5

      Conserved Domains (3) summary
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl02748
      Location:1060 → 1096
      zf-CDGSH; Iron-binding zinc finger CDGSH type
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily

    4. XM_015570880.1 → XP_015426366.1  protein AF-17 isoform X3

      Conserved Domains (4) summary
      smart00704
      Location:1057 → 1088
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl02748
      Location:1096 → 1132
      zf-CDGSH; Iron-binding zinc finger CDGSH type
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily

    5. XM_015570881.1 → XP_015426367.1  protein AF-17 isoform X4

      Conserved Domains (4) summary
      smart00704
      Location:1056 → 1087
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl02748
      Location:1095 → 1131
      zf-CDGSH; Iron-binding zinc finger CDGSH type
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily

    6. XM_015570879.1 → XP_015426365.1  protein AF-17 isoform X2

      Conserved Domains (4) summary
      smart00704
      Location:1060 → 1091
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      cd15709
      Location:38 → 161
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl02748
      Location:1099 → 1135
      zf-CDGSH; Iron-binding zinc finger CDGSH type
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily

    7. XM_015570878.1 → XP_015426364.1  protein AF-17 isoform X1

      Conserved Domains (4) summary
      smart00704
      Location:1061 → 1092
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      cd15709
      Location:38 → 162
      ePHD_AF17; Extended PHD finger found in protein AF-17 and similar proteins
      cl02748
      Location:1100 → 1136
      zf-CDGSH; Iron-binding zinc finger CDGSH type
      cl22851
      Location:14 → 31
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.