U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Slc10a5 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 [ Mus musculus (house mouse) ]

    Gene ID: 241877, updated on 9-Dec-2024

    Summary

    Official Symbol
    Slc10a5provided by MGI
    Official Full Name
    solute carrier family 10 (sodium/bile acid cotransporter family), member 5provided by MGI
    Primary source
    MGI:MGI:2685251
    See related
    Ensembl:ENSMUSG00000058921 AllianceGenome:MGI:2685251
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mP5; Gm405
    Summary
    Predicted to enable bile acid:sodium symporter activity. Predicted to be involved in bile acid and bile salt transport. Predicted to be located in membrane. Orthologous to human SLC10A5 (solute carrier family 10 member 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Slc10a5 in Genome Data Viewer
    Location:
    3 A1; 3 2.62 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (10396794..10400716, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (10331734..10335656, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 12 Neighboring gene STARR-seq mESC enhancer starr_06939 Neighboring gene predicted gene, 37316 Neighboring gene inositol (myo)-1(or 4)-monophosphatase 1 Neighboring gene STARR-positive B cell enhancer ABC_E7900 Neighboring gene STARR-positive B cell enhancer mm9_chr3:10351257-10351557 Neighboring gene zinc finger, AN1-type domain 1 Neighboring gene STARR-seq mESC enhancer starr_06944 Neighboring gene charged multivesicular body protein 4C

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables bile acid:sodium symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sodium/bile acid cotransporter 5
    Names
    Na(+)/bile acid cotransporter 5
    solute carrier family 10 member 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001010834.2NP_001010834.1  sodium/bile acid cotransporter 5 precursor

      See identical proteins and their annotated locations for NP_001010834.1

      Status: VALIDATED

      Source sequence(s)
      AC123726, AK143900
      Consensus CDS
      CCDS17241.1
      UniProtKB/Swiss-Prot
      B9EJ85, Q5PT54
      Related
      ENSMUSP00000077808.4, ENSMUST00000078748.4
      Conserved Domains (1) summary
      cl19217
      Location:136421
      SBF; Sodium Bile acid symporter family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      10396794..10400716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)