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    LOC102704677 nucleolar protein dao-5-like [ Oryza brachyantha (malo sina) ]

    Gene ID: 102704677, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC102704677
    Gene description
    nucleolar protein dao-5-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza brachyantha
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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    Genomic context

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    See LOC102704677 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current ObraRS2 (GCF_000231095.2) 2 NC_023164.2 (9208678..9211736)
    101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 2 NC_023164.1 (9281226..9284233)

    Chromosome 2 - NC_023164.2Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L5-1-like Neighboring gene uncharacterized LOC102704397 Neighboring gene ubiquinol oxidase 2, mitochondrial-like Neighboring gene protein MEI2-like 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleolar protein dao-5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ObraRS2 Primary Assembly

    Genomic

    1. NC_023164.2 Reference ObraRS2 Primary Assembly

      Range
      9208678..9211736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006648515.3 → XP_006648578.1  nucleolar protein dao-5-like

      UniProtKB/TrEMBL
      J3LC92
      Conserved Domains (1) summary
      pfam04504
      Location:203 → 290
      DUF573; Protein of unknown function, DUF573
    Nucleotide Protein
    Heading Accession and Version

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