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    LOTGIDRAFT_127834 hypothetical protein [ Lottia gigantea (owl limpet) ]

    Gene ID: 20232758, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LOTGIDRAFT_127834
    Gene description
    hypothetical protein
    Locus tag
    LOTGIDRAFT_127834
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Lottia gigantea
    Lineage
    Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia
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    Genomic context

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    See LOTGIDRAFT_127834 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_008710013.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008710013.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into bilaterian evolution from three spiralian genomes. Simakov O, et al. Nature, 2013 Jan 24. PMID 23254933, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CCR4-NOT complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA nuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA base-pairing translational repressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008710013.1 Reference assembly

      Range
      1266743..1270431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009063666.1 → XP_009061914.1  hypothetical protein LOTGIDRAFT_127834 [Lottia gigantea]

      See identical proteins and their annotated locations for XP_009061914.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      V4BF25
      Conserved Domains (2) summary
      cd10910
      Location:7 → 149
      limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
      cl17169
      Location:166 → 237
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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