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    LOC18431659 uncharacterized LOC18431659 [ Amborella trichopoda ]

    Gene ID: 18431659, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18431659
    Gene description
    uncharacterized LOC18431659
    Locus tag
    AMTR_s00003p00270420
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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    Genomic context

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    See LOC18431659 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498057.1 (10161998..10174627, complement)

    NW_006498057.1Genomic Context describing neighboring genes Neighboring gene shewanella-like protein phosphatase 2 Neighboring gene uncharacterized LOC18431657 Neighboring gene sugar carrier protein C Neighboring gene sugar carrier protein C-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006498057.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC18431659

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006498057.1 Reference AMTR1.0 Primary Assembly

      Range
      10161998..10174627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020665482.1 → XP_020521141.1  uncharacterized protein LOC18431659

      UniProtKB/TrEMBL
      W1P6F8
      Conserved Domains (2) summary
      pfam04937
      Location:189 → 353
      DUF659; Protein of unknown function (DUF 659)
      pfam05699
      Location:583 → 657
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region

    2. XM_020665481.1 → XP_020521140.1  uncharacterized protein LOC18431659

      UniProtKB/TrEMBL
      W1P6F8
      Conserved Domains (2) summary
      pfam04937
      Location:189 → 353
      DUF659; Protein of unknown function (DUF 659)
      pfam05699
      Location:583 → 657
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region

    3. XM_020665480.1 → XP_020521139.1  uncharacterized protein LOC18431659

      UniProtKB/TrEMBL
      W1P6F8
      Conserved Domains (2) summary
      pfam04937
      Location:189 → 353
      DUF659; Protein of unknown function (DUF 659)
      pfam05699
      Location:583 → 657
      Dimer_Tnp_hAT; hAT family C-terminal dimerisation region
    Nucleotide Protein
    Heading Accession and Version

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