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    MT1JP metallothionein 1J, pseudogene [ Homo sapiens (human) ]

    Gene ID: 4498, updated on 10-Dec-2024

    Summary

    Official Symbol
    MT1JPprovided by HGNC
    Official Full Name
    metallothionein 1J, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:7402
    See related
    Ensembl:ENSG00000290662 MIM:156356; AllianceGenome:HGNC:7402
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MT1; MTB; MT1J; MT1NP
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See MT1JP in Genome Data Viewer
    Location:
    16q13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (56635739..56637086)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (62430718..62432065)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (56669651..56670998)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:56659379-56659915 Neighboring gene metallothionein 1E Neighboring gene metallothionein 1M Neighboring gene metallothionein 1A Neighboring gene metallothionein 1D, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036677.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AF348994
      Related
      ENST00000563395.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      56635739..56637086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      62430718..62432065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005506.2: Suppressed sequence

      Description
      NG_005506.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
    2. NM_175622.3: Suppressed sequence

      Description
      NM_175622.3: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.