U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    CEP170 centrosomal protein 170 [ Zonotrichia albicollis (white-throated sparrow) ]

    Gene ID: 102070657, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CEP170
    Gene description
    centrosomal protein 170
    See related
    Ensembl:ENSZALG00000011432
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zonotrichia albicollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CEP170 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    102 current Zonotrichia_albicollis-1.0.1 (GCF_000385455.1) Unplaced Scaffold NW_005081620.1 (1670190..1763303, complement)

    NW_005081620.1Genomic Context describing neighboring genes Neighboring gene radial spoke head component 9 Neighboring gene phospholipase D family member 5 Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene AKT serine/threonine kinase 3 Neighboring gene zinc finger and BTB domain containing 18

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_005081620 Unplaced Scaffold Reference Zonotrichia_albicollis-1.0.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    centrosomal protein of 170 kDa

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Zonotrichia albicollis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zonotrichia_albicollis-1.0.1

    Genomic

    1. NW_005081620.1 Reference Zonotrichia_albicollis-1.0.1

      Range
      1670190..1763303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005489708.3 → XP_005489765.1  centrosomal protein of 170 kDa isoform X4

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1532
      CEP170_C; CEP170 C-terminus

    2. XM_005489710.3 → XP_005489767.1  centrosomal protein of 170 kDa isoform X8

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1485
      CEP170_C; CEP170 C-terminus

    3. XM_005489709.3 → XP_005489766.1  centrosomal protein of 170 kDa isoform X5

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Related
      ENSZALP00000013737.1, ENSZALT00000018721.1
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:815 → 1518
      CEP170_C; CEP170 C-terminus

    4. XM_005489707.3 → XP_005489764.1  centrosomal protein of 170 kDa isoform X3

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1541
      CEP170_C; CEP170 C-terminus

    5. XM_014268951.2 → XP_014124426.1  centrosomal protein of 170 kDa isoform X7

      UniProtKB/TrEMBL
      A0A8D2MWC0, A0A8D2MZU5
      Related
      ENSZALP00000013738.1, ENSZALT00000018722.1
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1502
      CEP170_C; CEP170 C-terminus

    6. XM_005489706.3 → XP_005489763.1  centrosomal protein of 170 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8D2MW30, A0A8D2MWC0
      Related
      ENSZALP00000013736.1, ENSZALT00000018720.1
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1558
      CEP170_C; CEP170 C-terminus

    7. XM_014268950.2 → XP_014124425.1  centrosomal protein of 170 kDa isoform X6

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1512
      CEP170_C; CEP170 C-terminus

    8. XM_005489705.3 → XP_005489762.1  centrosomal protein of 170 kDa isoform X1

      UniProtKB/TrEMBL
      A0A8D2MWC0
      Conserved Domains (3) summary
      COG1716
      Location:12 → 130
      FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
      cd00060
      Location:5 → 98
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam15308
      Location:865 → 1568
      CEP170_C; CEP170 C-terminus
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.