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    PPP1R1B protein phosphatase 1 regulatory inhibitor subunit 1B [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100390614, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PPP1R1B
    Gene description
    protein phosphatase 1 regulatory inhibitor subunit 1B
    See related
    Ensembl:ENSCJAG00000008712
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R1B in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (116175171..116185738)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (118898488..118909057)

    Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128932267 Neighboring gene neuronal differentiation 2 Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene uncharacterized LOC108591582 Neighboring gene titin-cap Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene post-GPI attachment to proteins phospholipase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 1B
    XP_002748571.1
    XP_008995738.1
    XP_008995739.1
    XP_035159218.1
    XP_035159219.1
    XP_035159220.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071446.1 Reference mCalJa1.2.pat.X

      Range
      116175171..116185738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002748525.6 → XP_002748571.1  protein phosphatase 1 regulatory subunit 1B isoform X1

      See identical proteins and their annotated locations for XP_002748571.1

      UniProtKB/TrEMBL
      A0A2R8P1L6, A5X4B2, F7HI10
      Related
      ENSCJAP00000009548.2
      Conserved Domains (1) summary
      pfam05395
      Location:2 → 112
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    2. XM_035303328.2 → XP_035159219.1  protein phosphatase 1 regulatory subunit 1B isoform X3

      UniProtKB/TrEMBL
      A0A2R8P1L6
      Conserved Domains (1) summary
      pfam05395
      Location:1 → 76
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    3. XM_008997491.3 → XP_008995739.1  protein phosphatase 1 regulatory subunit 1B isoform X3

      See identical proteins and their annotated locations for XP_008995739.1

      UniProtKB/TrEMBL
      A0A2R8P1L6
      Conserved Domains (1) summary
      pfam05395
      Location:1 → 76
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    4. XM_008997490.3 → XP_008995738.1  protein phosphatase 1 regulatory subunit 1B isoform X3

      See identical proteins and their annotated locations for XP_008995738.1

      UniProtKB/TrEMBL
      A0A2R8P1L6
      Conserved Domains (1) summary
      pfam05395
      Location:1 → 76
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    5. XM_035303329.2 → XP_035159220.1  protein phosphatase 1 regulatory subunit 1B isoform X3

      UniProtKB/TrEMBL
      A0A2R8P1L6
      Conserved Domains (1) summary
      pfam05395
      Location:1 → 76
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32

    6. XM_035303327.2 → XP_035159218.1  protein phosphatase 1 regulatory subunit 1B isoform X2

      UniProtKB/TrEMBL
      A0A2R8P1L6
      Conserved Domains (1) summary
      pfam05395
      Location:5 → 89
      DARPP-32; Protein phosphatase inhibitor 1/DARPP-32
    Nucleotide Protein
    Heading Accession and Version

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