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    CBR1 carbonyl reductase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100385429, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CBR1
    Gene description
    carbonyl reductase 1
    See related
    Ensembl:ENSCJAG00000038083
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See CBR1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 21 NC_071462.1 (40385632..40388823)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 21 NC_048403.1 (41023584..41026775)

    Chromosome 21 - NC_071462.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 4 Neighboring gene uncharacterized LOC108589422 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC108589420 Neighboring gene 40S ribosomal protein S9-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbonyl reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbonyl reductase [NADPH] 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071462.1 Reference mCalJa1.2.pat.X

      Range
      40385632..40388823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002761407.4 → XP_002761453.1  carbonyl reductase [NADPH] 1 isoform X1

      See identical proteins and their annotated locations for XP_002761453.1

      UniProtKB/TrEMBL
      F7HSL0, U3BU94, U3DG16
      Related
      ENSCJAP00000005087.2, ENSCJAT00000005360.2
      Conserved Domains (1) summary
      cd05324
      Location:7 → 277
      carb_red_PTCR-like_SDR_c; Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

    2. XM_008986643.4 → XP_008984891.1  carbonyl reductase [NADPH] 1 isoform X2

      UniProtKB/TrEMBL
      F7HSL5
      Related
      ENSCJAP00000005084.2
      Conserved Domains (1) summary
      cl21454
      Location:7 → 143
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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