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    STX17 syntaxin 17 [ Camelus ferus (Wild Bactrian camel) ]

    Gene ID: 102521983, updated on 10-Mar-2024

    Summary

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    Gene symbol
    STX17
    Gene description
    syntaxin 17
    Locus tag
    CB1_000794017
    See related
    EnsemblRapid:ENSCFEG00005007280
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelus ferus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
    Orthologs
    human mouse all
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    Genomic context

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    See STX17 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 4 NC_045699.1 (47420748..47489989)
    101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210970.1 (1212268..1266863, complement)

    Chromosome 4 - NC_045699.1Genomic Context describing neighboring genes Neighboring gene ALG2 alpha-1,3/1,6-mannosyltransferase Neighboring gene SEC61 translocon subunit beta Neighboring gene nuclear receptor subfamily 4 group A member 3 Neighboring gene endoplasmic reticulum protein 44 Neighboring gene inversin Neighboring gene small nucleolar RNA SNORA44 Neighboring gene testis expressed 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in autophagosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin-17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BCGSAC_Cfer_1.0 Primary Assembly

    Genomic

    1. NC_045699.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

      Range
      47420748..47489989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032478084.1 → XP_032333975.1  syntaxin-17

      UniProtKB/TrEMBL
      A0A8B8SVI5
      Related
      ENSCFEP00005012039.1, ENSCFET00005013469.1
      Conserved Domains (2) summary
      COG5074
      Location:105 → 231
      COG5074; t-SNARE complex subunit, syntaxin [Intracellular trafficking, secretion, and vesicular transport]
      cd15846
      Location:162 → 223
      SNARE_syntaxin17; SNARE motif of syntaxin 17

    RNA

    1. XR_004319365.1 RNA Sequence

    2. XR_004319366.1 RNA Sequence

    3. XR_004319363.1 RNA Sequence

    4. XR_004319364.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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