APRR2 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: APRR2
Official Full Name: CheY-like two-component responsive regulator family protein
Primary source: TAIR:AT4G18020
Locus tag: AT4G18020
See related: Araport:AT4G18020
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: PRR2; PSEUDO-RESPONSE REGULATOR 2; T6K21.200; T6K21_200
Summary: Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).
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Genomic context

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See APRR2 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 11

Sequence:: Chromosome: 4; NC_003075.7 (10002846..10007626, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The interaction between PRR2 and TCP19 or TCP20 would contribute to the biological function in specific nuclear compartments.
Title: Specific TCP transcription factors interact with and stabilize PRR2 within different nuclear sub-domains.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001084936.2

Supported by ESTs:

NM_001160778.2

Supported by ESTs:

NM_001203830.1

Supported by ESTs:

NM_001341252.1

Supported by ESTs:

NM_001341253.1

Supported by ESTs:

NM_001341254.1

Supported by ESTs:

NM_001341255.1

Supported by ESTs:

NM_001341256.1

Supported by ESTs:

NM_179072.3

Supported by ESTs:

NM_179073.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables phosphorelay response regulator activity	ISS Inferred from Sequence or Structural Similarity more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables transcription cis-regulatory region binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within circadian rhythm	TAS Traceable Author Statement more info	PubMed
involved_in positive regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	ISM Inferred from Sequence Model more info
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: CheY-like two-component responsive regulator family protein

NP_001078405.1

APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 2718 Blast hits to 2527 proteins in 207 species: Archae - 2; Bacteria - 157; Metazoa - 87; Fungi - 7; Plants - 2297; Viruses - 3; Other Eukaryotes - 165 (source: NCBI BLink).

NP_001154250.1

CheY-like two-component responsive regulator family protein; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 2718 Blast hits to 2527 proteins in 207 species: Archae - 2; Bacteria - 157; Metazoa - 87; Fungi - 7; Plants - 2297; Viruses - 3; Other Eukaryotes - 165 (source: NCBI BLink).

NP_001190759.1

APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1).

NP_567548.1

APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_849403.1

APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 2748 Blast hits to 2554 proteins in 214 species: Archae - 2; Bacteria - 157; Metazoa - 112; Fungi - 7; Plants - 2302; Viruses - 3; Other Eukaryotes - 165 (source: NCBI BLink).

NP_849404.2

APRR2; CONTAINS InterPro DOMAIN/s: Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: GBF's pro-rich region-interacting factor 1 (TAIR:AT2G20570.1); Has 2748 Blast hits to 2554 proteins in 214 species: Archae - 2; Bacteria - 157; Metazoa - 112; Fungi - 7; Plants - 2302; Viruses - 3; Other Eukaryotes - 165 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

10002846..10007626 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_117912.4 → NP_567548.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_567548.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O49701, Q6LA43, Q94F45

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (4) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

PLN03162
Location:242 → 526

PLN03162; golden-2 like transcription factor; Provisional

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_001160778.2 → NP_001154250.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001154250.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (3) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_001341255.1 → NP_001329340.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225
NM_001341254.1 → NP_001329339.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225
NM_001203830.1 → NP_001190759.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001190759.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O49701, Q6LA43, Q94F45

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (4) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

PLN03162
Location:242 → 526

PLN03162; golden-2 like transcription factor; Provisional

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_179072.3 → NP_849403.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_849403.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O49701, Q6LA43, Q94F45

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (4) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

PLN03162
Location:242 → 526

PLN03162; golden-2 like transcription factor; Provisional

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_179073.4 → NP_849404.2 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_849404.2

Status: REVIEWED

UniProtKB/Swiss-Prot

O49701, Q6LA43, Q94F45

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (4) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

PLN03162
Location:242 → 526

PLN03162; golden-2 like transcription factor; Provisional

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_001084936.2 → NP_001078405.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001078405.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (3) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_001341256.1 → NP_001329341.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

O49701, Q6LA43, Q94F45

UniProtKB/TrEMBL

A0A178V225

Conserved Domains (4) summary

TIGR01557
Location:296 → 351

myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

PLN03162
Location:242 → 526

PLN03162; golden-2 like transcription factor; Provisional

pfam07777
Location:382 → 430

MFMR; G-box binding protein MFMR

cl19078
Location:40 → 134

REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
NM_001341253.1 → NP_001329343.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225
NM_001341252.1 → NP_001329342.1 CheY-like two-component responsive regulator family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V225