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    def peptide deformylase [ Ralstonia pseudosolanacearum ]

    Gene ID: 93854184, updated on 13-Dec-2024

    Summary

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    Gene symbol
    def
    Gene description
    peptide deformylase
    Locus tag
    NY025_RS25175
    Gene type
    protein coding
    Organism
    Ralstonia pseudosolanacearum (strain: LMG 9673, type-material: type strain of Ralstonia pseudosolanacearum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia solanacearum species complex
    Old locus tag
    NY025_25175
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_CP103852.1Genomic Context describing neighboring genes Neighboring gene methionyl-tRNA formyltransferase Neighboring gene glycosyltransferase family 39 protein Neighboring gene LysM peptidoglycan-binding domain-containing protein Neighboring gene DNA-processing protein DprA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP103852.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850
    2. Proposal to classify Ralstonia solanacearum phylotype I strains as Ralstonia nicotianae sp. nov., and a genomic comparison between members of the genus Ralstonia. Liu JY, et al. Front Microbiol, 2023. PMID 37032877, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    peptide deformylase
    WP_020750043.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP103852.1 Reference assembly

      Range
      3703555..3704064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_020750043.1 MULTISPECIES: peptide deformylase [Ralstonia solanacearum species complex]

      See identical proteins and their annotated locations for WP_020750043.1

      UniProtKB/TrEMBL
      A0AA92JUN5
    Nucleotide Protein
    Heading Accession and Version