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    ubxn8.L UBX domain protein 8 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446946, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ubxn8.L
    Official Full Name
    UBX domain protein 8 L homeolog
    Primary source
    Xenbase:XB-GENE-6254850
    Locus tag
    XELAEV_18006172mg
    See related
    EnsemblRapid:ENSXLAG00005015642 AllianceGenome:Xenbase:XB-GENE-6254850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    rep8; ubxd6; ubxn8
    Summary
    Predicted to act upstream of or within ERAD pathway. Predicted to be located in membrane. Orthologous to human UBXN8 (UBX domain protein 8). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ubxn8.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (105806704..105824574)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (94136087..94153963)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108696621 Neighboring gene uncharacterized LOC108712236 Neighboring gene protein phosphatase 2, catalytic subunit, beta isozyme L homeolog Neighboring gene Werner syndrome, RecQ helicase-like L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within ERAD pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    UBX domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      105806704..105824574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018254401.2 → XP_018109890.1  UBX domain-containing protein 8

      UniProtKB/TrEMBL
      A0A974I3B2, A3KNB8, Q569Q9
      Related
      ENSXLAP00005045921.1, ENSXLAT00005047020.1
    Nucleotide Protein Strain
    Heading Accession and Version

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