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    IS178_RS23100 HigA family addiction module antitoxin [ Pseudomonas fragi ]

    Gene ID: 72390699, updated on 10-Dec-2024

    Summary

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    Gene symbol
    IS178_RS23100
    Gene description
    HigA family addiction module antitoxin
    Locus tag
    IS178_RS23100
    Gene type
    protein coding
    Organism
    Pseudomonas fragi (strain: NL20W)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    IS178_23100
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    Genomic context

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    NZ_CP064354.1Genomic Context describing neighboring genes Neighboring gene accessory factor UbiK family protein Neighboring gene VOC family protein Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene YifB family Mg chelatase-like AAA ATPase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP064354.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a higBA toxin-antitoxin locus in Vibrio cholerae. Budde PP, et al. J Bacteriol, 2007 Jan. PMID 17085558, Free PMC Article
    2. The HigB/HigA toxin/antitoxin system of Pseudomonas aeruginosa influences the virulence factors pyochelin, pyocyanin, and biofilm formation. Wood TL, et al. Microbiologyopen, 2016 Jun. PMID 26987441, Free PMC Article
    3. Specific protein-DNA and protein-protein interaction in the hig gene system, a plasmid-borne proteic killer gene system of plasmid Rts1. Tian QB, et al. Plasmid, 2001 Mar. PMID 11322821

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    HigA family addiction module antitoxin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP064354.1 Reference assembly

      Range
      5065930..5066235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_016782667.1 HigA family addiction module antitoxin [Pseudomonas fragi]

      UniProtKB/TrEMBL
      A0A9Q6YF21
      Conserved Domains (1) summary
      TIGR02607
      Location:7 → 83
      antidote_HigA; addiction module antidote protein, HigA family
    Nucleotide Protein
    Heading Accession and Version

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