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    LOC107275786 glutamate receptor 2.8 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107275786, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC107275786
    Gene description
    glutamate receptor 2.8
    Locus tag
    OSNPB_090429000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC107275786 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (19967963..19972743, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (15588259..15594267, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene glutamate receptor 2.8 Neighboring gene uncharacterized LOC4347120 Neighboring gene uncharacterized LOC4347121 Neighboring gene uncharacterized LOC107278794 Neighboring gene uncharacterized LOC112936445 Neighboring gene glutamate receptor 2.6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate receptor 2.8
    Names
    Os09g0429000
    P0689B09.15
    putative Avr9/Cf-9 rapidly elicited protein 141

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      19967963..19972743 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015755330.3 → XP_015610816.2  glutamate receptor 2.8

      UniProtKB/TrEMBL
      A0A0P0XM06, A3BZ21, Q69L11
    Nucleotide Protein
    Heading Accession and Version

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