U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    mrps33 mitochondrial ribosomal protein S33 [ Danio rerio (zebrafish) ]

    Gene ID: 432383, updated on 9-Dec-2024

    Summary

    Official Symbol
    mrps33provided by ZNC
    Official Full Name
    mitochondrial ribosomal protein S33provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040715-6
    See related
    Ensembl:ENSDARG00000020015 AllianceGenome:ZFIN:ZDB-GENE-040715-6
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:110295
    Summary
    Predicted to be located in ribosome. Predicted to be part of ribonucleoprotein complex. Predicted to be active in mitochondrion. Is expressed in otic vesicle and sensory system. Orthologous to human MRPS33 (mitochondrial ribosomal protein S33). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See mrps33 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (12102267..12106039, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (12103418..12107190, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137491525 Neighboring gene B-Raf proto-oncogene, serine/threonine kinase Neighboring gene transmembrane protein 178Bb Neighboring gene si:ch211-9f20.4 Neighboring gene CCR4-NOT transcription complex, subunit 4b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small ribosomal subunit protein mS33

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002306.2NP_001002306.1  small ribosomal subunit protein mS33

      See identical proteins and their annotated locations for NP_001002306.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095219
      UniProtKB/TrEMBL
      F6NJF5, Q503R0, Q6L5P4
      Related
      ENSDARP00000048674.5, ENSDART00000048675.6
      Conserved Domains (1) summary
      pfam08293
      Location:796
      MRP-S33; Mitochondrial ribosomal subunit S27

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      12102267..12106039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)