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    LOC101507037 nodulation receptor kinase [ Cicer arietinum (chickpea) ]

    Gene ID: 101507037, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101507037
    Gene description
    nodulation receptor kinase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cicer arietinum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Cicereae; Cicer
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    Genomic context

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    See LOC101507037 in Genome Data Viewer
    Location:
    chromosome: Ca8
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current ASM33114v1 (GCF_000331145.1) Ca8 NC_021167.1 (9138212..9146028)

    Chromosome Ca8 - NC_021167.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g37920 Neighboring gene ABCG transporter STR2-like Neighboring gene protein BRICK 1 Neighboring gene probable cytosolic oligopeptidase A Neighboring gene serine hydroxymethyltransferase, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_021167.1 Chromosome Ca8 Reference ASM33114v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nodulation receptor kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cicer arietinum Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM33114v1 Primary Assembly

    Genomic

    1. NC_021167.1 Reference ASM33114v1 Primary Assembly

      Range
      9138212..9146028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004512493.3 → XP_004512550.1  nodulation receptor kinase

      UniProtKB/TrEMBL
      A0A1S2YZW4
      Conserved Domains (5) summary
      smart00221
      Location:602 → 868
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:602 → 869
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:408 → 430
      LRR_RI; leucine-rich repeat [structural motif]
      pfam11721
      Location:252 → 331
      Malectin; Di-glucose binding within endoplasmic reticulum
      pfam12819
      Location:41 → 345
      Malectin_like; Carbohydrate-binding protein of the ER
    Nucleotide Protein
    Heading Accession and Version

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