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    I6L63_RS16040 type B 50S ribosomal protein L31 [ Enterobacter hormaechei ]

    Gene ID: 93200600, updated on 3-Dec-2024

    Summary

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    Gene symbol
    I6L63_RS16040
    Gene description
    type B 50S ribosomal protein L31
    Locus tag
    I6L63_RS16040
    Gene type
    protein coding
    Organism
    Enterobacter hormaechei (strain: FDAARGOS 1433, culture-collection: DSM:12409, type-material: type strain of Enterobacter hormaechei)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex
    Old locus tag
    I6L63_16040
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    Genomic context

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    NZ_CP077308.1Genomic Context describing neighboring genes Neighboring gene YlaC family protein Neighboring gene type B 50S ribosomal protein L36 Neighboring gene EAL domain-containing protein Neighboring gene metal-sensing transcriptional repressor Neighboring gene nickel/cobalt efflux protein RcnA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP077308.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. YkgM and YkgO maintain translation by replacing their paralogs, zinc-binding ribosomal proteins L31 and L36, with identical activities. Ueta M, et al. Genes Cells, 2020 Aug. PMID 32559334
    2. Liberation of zinc-containing L31 (RpmE) from ribosomes by its paralogous gene product, YtiA, in Bacillus subtilis. Akanuma G, et al. J Bacteriol, 2006 Apr. PMID 16547061, Free PMC Article
    3. Dissemination of Verona Integron-encoded Metallo-β-lactamase among clinical and environmental Enterobacteriaceae isolates in Ontario, Canada. Kohler P, et al. Sci Rep, 2020 Oct 29. PMID 33122675, Free PMC Article
    4. Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins. Makarova KS, et al. Genome Biol, 2001. PMID 11574053, Free PMC Article
    5. Zinc is a key factor in controlling alternation of two types of L31 protein in the Bacillus subtilis ribosome. Nanamiya H, et al. Mol Microbiol, 2004 Apr. PMID 15049826

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type B 50S ribosomal protein L31

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP077308.1 Reference assembly

      Range
      3292500..3292760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_006809853.1 MULTISPECIES: type B 50S ribosomal protein L31 [Enterobacter]

      See identical proteins and their annotated locations for WP_006809853.1

      UniProtKB/TrEMBL
      A0AAN3PH89, A0AAW8ZDL6
    Nucleotide Protein
    Heading Accession and Version