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    rpoN RNA polymerase factor sigma-54 [ Bacteroides fragilis NCTC 9343 ]

    Gene ID: 60366421, updated on 11-Dec-2024

    Summary

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    Gene symbol
    rpoN
    Gene description
    RNA polymerase factor sigma-54
    Locus tag
    BF9343_RS20245
    Gene type
    protein coding
    Organism
    Bacteroides fragilis NCTC 9343 (strain: NCTC 9343, culture-collection: ATCC:25285, culture-collection: NCTC:9343, type-material: type strain of Bacteroides fragilis)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    BF9343_4052
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    Genomic context

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    Sequence:
    NC_003228.3 (4900356..4901834)

    NC_003228.3Genomic Context describing neighboring genes Neighboring gene DNA-binding protein Neighboring gene aminopeptidase P family protein Neighboring gene membrane protein Neighboring gene glycine cleavage system protein GcvH

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003228.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The -24/-12 promoter comes of age. Thöny B, et al. FEMS Microbiol Rev, 1989 Dec. PMID 2517036
    2. Extensive DNA inversions in the B. fragilis genome control variable gene expression. Cerdeño-Tárraga AM, et al. Science, 2005 Mar 4. PMID 15746427

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    RNA polymerase factor sigma-54

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003228.3 Reference assembly

      Range
      4900356..4901834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005791309.1 RNA polymerase factor sigma-54 [Bacteroides fragilis]

      See identical proteins and their annotated locations for WP_005791309.1

      UniProtKB/TrEMBL
      A0A015TVL9, A0A015WX76, A0A015YE85, A0A016CSE9, A0A0E2AJU2, A0A2M9VD14, A0AAN4MY50, A0AAV3N4I6, D1JVI2, E1WQN8, Q5L7W6
    Nucleotide Protein
    Heading Accession and Version

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